PhD Research Project

Lalita Ramakrishnan / Roni Levin Konigsberg

Mechanisms of clearance of Mycobaterium-tuberculosis-infected macrophages

Lalita Ramakrishnan

Mycobacterium tuberculosis infects macrophages and can commandeer their machinery to survive intracellularly. Infected macrophages aggregate into granulomas, hallmark immunopathological structures of TB. Often, granuloma macrophages clear infection; however, mycobacteria can exploit granulomas for disease progression. In particular the bacteria can cause apoptosis (programmed cell death) of infected macrophages after which uninfected macrophages are recruited to engulf the dying cells and their contents.

This process, called efferocytosis, is critical for clearing apoptotic cells and debris during development, tissue homeostasis and several inflammatory conditions. We have found it to also be important in determining the fate of TB: efficient efferocytosis that keeps pace with infected macrophage death  in the granuloma will result in clearance of infection. Conversely, if apoptotic death outpaces efferocytosis, granulomas undergo necrosis, a key pathogenic event that promotes mycobacterial growth in the accumulating cell debris.

How mycobacterium-infected apoptotic cells are cleared and the fate of mycobacteria in the efferocytic macrophages is not understood. This project will use the zebrafish TB model and cultured mammalian macrophages to characterise how healthy macrophages respond to mycobacterium-infected apoptotic cells to engulf them, and whether the underlying mechanisms are different from those of homeostatic (“housekeeping”) efferocytosis. It will seek to understand the fate of healthy macrophages after efferocytosis, and how their mycobacterial cargo is trafficked and processed within them. The successful candidate will gain interdisciplinary expertise in cell biology, immunology, microbiology and infectious diseases, as well as in genetic and molecular biology, advanced microscopy, mammalian cell culture and the use of zebrafish as a disease model.

Relevant Reading

mTOR-regulated mitochondrial metabolism limits mycobacterium-induced cytotoxicity.Pagán AJ, Lee LJ, Edwards-Hicks J, Moens CB, Tobin DM, Busch-Nentwich EM, Pearce EL, Ramakrishnan LCell 185(20): 3720-3738.e13 (2022)
TNF Induces Pathogenic Programmed Macrophage Necrosis in Tuberculosis through a Mitochondrial-Lysosomal-Endoplasmic Reticulum Circuit.Roca FJ, Whitworth LJ, Redmond S, Jones AA, Ramakrishnan LCell 178(6): 1344-1361.e11 (2020)
Phagolysosome resolution requires contacts with the endoplasmic reticulum and phosphatidylinositol-4-phosphate signalling.Levin-Konigsberg R, Montaño-Rendón F, Keren-Kaplan T, Li R, Ego B, Mylvaganam S, DiCiccio JE, Trimble WS, Bassik MC, Bonifacino JS, Fairn GD, Grinstein SNat Cell Biol 21(10): 1234-1247 (2020)

Loading...