Fellow

Gerald Rubin

Sponsored by Gregory Jefferis

Gerald Rubin

My research focusses on developing an experimental approach to neurobiology based on the comprehensive identification and manipulation of individual cell types and circuits. My group  at the HHMI Janelia Research Campus is using the tools and methods we develop to study the neuronal circuits in Drosophila that underlie visual perception, sensory integration and aggression. We have recently extended our research to study the distribution and function of individual proteins and molecular machines that play key roles in neuronal cell biology, such as electrical synapses and the dense core vesicles that secrete neuropeptides.

With Greg Jefferis’s group, we are working as part of a large international collaboration, to determine the complete wiring diagram – or connectome – of the adult Drosophila nervous system and to use that wiring diagram to gain insights into how the brain controls behaviour. We are also developing methods that use expansion microscopy to map the location of individual proteins within neurons.

Selected Publications

Social state alters vision using three circuit mechanisms in Drosophila.Schretter CE, Hindmarsh Sten T, Klapoetke N, Shao M, Nern A, Dreher M, Bushey D, Robie AA, Taylor AL, Branson K, Otopalik A, Ruta V, Rubin GMNature 637(8046): 646-653 (2025)
Connectome-driven neural inventory of a complete visual system.Nern A, Loesche F, Takemura SY, Burnett LE, Dreher M, Gruntman E, Hoeller J, Huang GB, Januszewski M, Klapoetke NC, Koskela S, Longden KD, Lu Z, Preibisch S, Qiu W, Rogers EM, Seenivasan P, Zhao A, Bogovic J, Canino BS, Clements J, Cook M, Finley-May S, Flynn MA, Hameed I, Fragniere AM, Hayworth KJ, Hopkins GP, Hubbard PM, Katz WT, Kovalyak J, Lauchie SA, Leonard M, Lohff A, Maldonado CA, Mooney C, Okeoma N, Olbris DJ, Ordish C, Paterson T, Phillips EM, Pietzsch T, Salinas JR, Rivlin PK, Schlegel P, Scott AL, Scuderi LA, Takemura S, Talebi I, Thomson A, Trautman ET, Umayam L, Walsh C, Walsh JJ, Xu CS, Yakal EA, Yang T, Zhao T, Funke J, George R, Hess HF, Jefferis GS, Knecht C, Korff W, Plaza SM, Romani S, Saalfeld S, Scheffer LK, Berg S, Rubin GM, Reiser MBbioRxiv Epub
The connectome of the adult Drosophila mushroom body provides insights into function.Li F, Lindsey JW, Marin EC, Otto N, Dreher M, Dempsey G, Stark I, Bates AS, Pleijzier MW, Schlegel P, Nern A, Takemura SY, Eckstein N, Yang T, Francis A, Braun A, Parekh R, Costa M, Scheffer LK, Aso Y, Jefferis GS, Abbott LF, Litwin-Kumar A, Waddell S, Rubin GMElife 9: (2021) Epub